STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32646.1Pfam:pfam12698 ABC-2 family transporter protein. (247 aa)    
Predicted Functional Partners:
AMM32647.1
ABC-type multidrug transport system ATPase component; Pfam:pfam00005 ABC transporter.
 
  
 0.965
AMM32645.1
Pfam:pfam02628 Cytochrome oxidase assembly protein.
   
 0.957
AMM32648.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
     0.730
AMM32537.1
Hypothetical protein.
  
     0.695
AMM32750.1
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.660
AMM32649.1
Iron-regulated ABC transporter membrane component SufB; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
     
 0.655
AMM32650.1
ABC transporter permease; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
     
 0.655
AMM32651.1
Cysteine desulfurase; Pfam:pfam00005 ABC transporter.
     
 0.611
AMM33024.1
Membrane protein.
 
   
 0.610
AMM32657.1
Putative ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
  
 
 0.603
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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