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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32656.1Putative ABC transporter permease protein; Pfam:pfam02361 Cobalt transport protein. (206 aa)    
Predicted Functional Partners:
AMM32658.1
Biotin operon repressor; Pfam:pfam02632 BioY family.
 
 0.997
AMM32657.1
Putative ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.990
AMM31933.1
Biotin operon repressor; Pfam:pfam02632 BioY family.
 
 0.988
AMM32561.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
  
 
 0.648
AMM33312.1
Putative peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
  
 
 0.648
AMM33411.1
Putative peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
  
 
 0.648
AMM34169.1
Pfam:pfam00005 ABC transporter.
  
 
 0.648
AMM34475.1
Oligopeptide/dipeptide transporter, C-terminal domain protein; Pfam:pfam00005 ABC transporter.
  
 
 0.648
AMM32996.1
Pfam:pfam08543 Phosphomethylpyrimidine kinase.
  
  
 0.593
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.551
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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