STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32658.1Biotin operon repressor; Pfam:pfam02632 BioY family. (213 aa)    
Predicted Functional Partners:
AMM32656.1
Putative ABC transporter permease protein; Pfam:pfam02361 Cobalt transport protein.
 
 0.997
AMM32657.1
Putative ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.988
AMM32559.1
Pfam:pfam02361 Cobalt transport protein.
 
 0.950
AMM34168.1
Pfam:pfam02361 Cobalt transport protein.
  
 0.941
AMM31933.1
Biotin operon repressor; Pfam:pfam02632 BioY family.
  
  
 
0.901
AMM32561.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
    
  0.806
AMM32220.1
biotin-(acetyl-CoA carboxylase) ligase; Pfam:pfam03099 Biotin/lipoate A/B protein ligase family.
 
   
 0.591
AMM32659.1
Hypothetical protein.
       0.520
AMM30781.1
Acetyl-CoA carboxylase beta subunit; Pfam:pfam01039 Carboxyl transferase domain.
 
   
 0.486
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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