STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32661.1Formate dehydrogenase; Pfam:pfam01568 Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1080 aa)    
Predicted Functional Partners:
AMM32662.1
Pfam:pfam13247 4Fe-4S dicluster domain.
 
 0.997
AMM32199.1
Ferredoxin; Pfam:pfam13247 4Fe-4S dicluster domain.
 
 0.989
AMM32663.1
Pfam:pfam03916 Polysulphide reductase, NrfD.
 
     0.950
AMM32197.1
Dehydrogenase; Pfam:pfam04879 Molybdopterin oxidoreductase Fe4S4 domain.
 
 
0.922
AMM32198.1
Formate dehydrogenase subunit alpha; Pfam:pfam01568 Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.902
AMM32016.1
Formaldehyde dehydrogenase, glutathione-independent; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
    
 0.901
AMM33617.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
    
 0.901
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.816
AMM33995.1
Malate dehydrogenase; Pfam:pfam03949 Malic enzyme, NAD binding domain.
    
 0.815
AMM34280.1
Malate dehydrogenase (Oxaloacetate decarboxylating); Pfam:pfam03949 Malic enzyme, NAD binding domain.
    
 0.815
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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