STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32668.1Pfam:pfam11298 Protein of unknown function (DUF3099). (170 aa)    
Predicted Functional Partners:
AMM32666.1
Hypothetical protein; Pfam:pfam02104 SURF1 family.
 
     0.883
AMM32667.1
Hypothetical protein.
       0.853
AMM32665.1
prolyl-tRNA synthetase; Pfam:pfam04073 Aminoacyl-tRNA editing domain.
       0.773
AMM32669.1
3-oxoacyl-(Acyl-carrier-protein) reductase; Pfam:pfam00106 short chain dehydrogenase.
       0.551
AMM30923.1
Hypothetical protein.
  
     0.448
AMM32835.1
Pfam:pfam00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
  
     0.436
AMM31484.1
Lipopolysaccharide kinase; Pfam:pfam13224 Domain of unknown function (DUF4032).
  
     0.413
AMM32670.1
Dehydrogenase; Pfam:pfam00106 short chain dehydrogenase.
       0.401
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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