Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM32673.1Membrane protein; Pfam:pfam01925 Sulfite exporter TauE/SafE. (265 aa)    
Predicted Functional Partners:
AMM32672.1
Iron ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
       0.835
AMM32674.1
Pfam:pfam00588 SpoU rRNA Methylase family.
       0.835
rpmE2
Pfam:pfam01197 Ribosomal protein L31.
       0.560
pheT
phenylalanyl-tRNA synthetase subunit beta; Pfam:pfam03483 B3/4 domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.557
AMM32671.1
Phosphoserine phosphatase; Pfam:pfam12710 haloacid dehalogenase-like hydrolase.
       0.528
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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