STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32679.1Hypothetical protein; Pfam:pfam04168 A predicted alpha-helical domain with a conserved ER motif. (308 aa)    
Predicted Functional Partners:
AMM32680.1
Transglutaminase; Pfam:pfam08379 Bacterial transglutaminase-like N-terminal region.
  
 0.998
AMM32678.1
UDP-N-acetylmuramate dehydrogenase; Pfam:pfam04174 A circularly permuted ATPgrasp.
  
 0.992
AMM33125.1
Pfam:pfam01841 Transglutaminase-like superfamily.
 
  
 0.836
AMM32681.1
Hypothetical protein.
       0.464
AMM32677.1
Aminopeptidase G; Pfam:pfam01433 Peptidase family M1.
       0.433
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.