STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32688.1Acetyl-CoA acyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (440 aa)    
Predicted Functional Partners:
AMM32563.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 0.988
AMM32686.1
Pfam:pfam01756 Acyl-CoA oxidase.
 
 0.982
AMM33884.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 0.975
AMM32690.1
Dehydratase; Pfam:pfam01575 MaoC like domain.
 
 
 0.968
AMM34076.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 0.967
AMM32918.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.943
AMM32689.1
Short-chain dehydrogenase/reductase SDR; Pfam:pfam00106 short chain dehydrogenase.
 
 
 0.939
AMM33858.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.933
AMM33398.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
  
 0.931
AMM34428.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
  
 
 0.928
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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