STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32693.1Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (386 aa)    
Predicted Functional Partners:
AMM32563.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.820
AMM33326.1
Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain.
  
 
 0.702
AMM33327.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
  
 
 0.689
AMM32923.1
MaoC family dehydratase; Pfam:pfam01575 MaoC like domain.
  
 0.683
AMM32131.1
Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
  
 0.645
AMM32464.1
Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
  
 0.645
AMM32692.1
Pfam:pfam01546 Peptidase family M20/M25/M40.
  
  
 0.625
AMM31983.1
Long-chain-fatty-acid-CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
  
 
 0.585
AMM33745.1
Acyl-CoA ligase/synthetase; Pfam:pfam00501 AMP-binding enzyme.
  
 
 0.585
AMM33846.1
Crotonase; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
  
 0.582
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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