STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32699.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
AMM32700.1
Hypothetical protein.
 
     0.913
AMM32537.1
Hypothetical protein.
  
     0.663
AMM32380.1
Pfam:pfam07179 SseB protein N-terminal domain.
  
     0.656
AMM30977.1
Pfam:pfam11377 Protein of unknown function (DUF3180).
  
     0.626
AMM33235.1
Putative lipase/esterase; Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family.
  
     0.607
AMM33236.1
Anti-sigma factor.
  
     0.555
AMM31248.1
Putative transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain.
  
     0.551
AMM32466.1
Hypothetical protein.
  
     0.551
uppP
UDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.546
mshC
L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
       0.538
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.