STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32772.1Pfam:pfam09685 Tic20-like protein. (133 aa)    
Predicted Functional Partners:
AMM32578.1
Cytochrome P450.
  
     0.696
AMM32771.1
Pfam:pfam11296 Protein of unknown function (DUF3097).
  
    0.694
AMM34730.1
ABC transporter substrate-binding protein.
  
     0.624
hrcA
Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
       0.568
AMM32024.1
Membrane protein.
  
     0.566
AMM32113.1
Pfam:pfam14030 Protein of unknown function (DUF4245).
  
     0.561
AMM32096.1
Hypothetical protein; Pfam:pfam14155 Domain of unknown function (DUF4307).
  
     0.539
AMM31467.1
Hypothetical protein.
  
     0.532
AMM32768.1
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.530
AMM32723.1
Membrane protease regulatory membrane protein; Pfam:pfam01957 NfeD-like C-terminal, partner-binding.
   
  
 0.527
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.