Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM32785.1Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)    
Predicted Functional Partners:
AMM32788.1
Gluconate 5-dehydrogenase; Pfam:pfam00106 short chain dehydrogenase.
 
   
0.668
AMM32781.1
Nitrogen assimilation regulatory protein Nac; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
 
   
 0.651
AMM32733.1
Oxidoreductase; Pfam:pfam00106 short chain dehydrogenase.
 
    0.631
AMM33527.1
Hypothetical protein; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
    0.616
AMM32263.1
Oxidoreductase; Pfam:pfam13459 4Fe-4S single cluster domain.
  
  
 0.554
AMM32786.1
Hypothetical protein.
       0.542
AMM32787.1
Pfam:pfam01202 Shikimate kinase.
       0.542
pxpA
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.537
AMM32784.1
Pfam:pfam02626 Allophanate hydrolase subunit 2.
  
    0.532
AMM32783.1
Pfam:pfam02682 Allophanate hydrolase subunit 1.
       0.528
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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