Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM32795.1DegV family protein; Pfam:pfam02645 Uncharacterized protein, DegV family COG1307. (331 aa)    
Predicted Functional Partners:
AMM33085.1
Pfam:pfam02734 DAK2 domain.
 
 0.976
leuS
Pfam:pfam13603 Leucyl-tRNA synthetase, Domain 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.839
AMM32794.1
Putative DNA-binding protein; Pfam:pfam12836 Helix-hairpin-helix motif.
 
     0.704
AMM32986.1
Phosphoglycerate mutase; Pfam:pfam00300 Histidine phosphatase superfamily (branch 1).
 
  
 0.645
AMM32793.1
Pfam:pfam03772 Competence protein.
       0.634
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.464
AMM32130.1
Integral membrane protein; Pfam:pfam07314 Protein of unknown function (DUF1461).
 
    0.452
AMM32277.1
Pfam:pfam07332 Protein of unknown function (DUF1469).
  
     0.441
AMM33773.1
3-methyladenine DNA glycosylase; Pfam:pfam00730 HhH-GPD superfamily base excision DNA repair protein.
  
     0.401
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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