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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
gene fusions
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[Homology]
Score
AMM32831.1ATPase AAA; Pfam:pfam12002 MgsA AAA+ ATPase C terminal. (478 aa)    
Predicted Functional Partners:
AMM31281.1
O-acetyl-ADP-ribose deacetylase; Pfam:pfam01661 Macro domain.
  
   0.913
AMM33336.1
ATP-dependent DNA helicase; Pfam:pfam00580 UvrD/REP helicase N-terminal domain.
  
 
 0.854
AMM30707.1
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 
 0.813
AMM32660.1
ATP-dependent DNA helicase RecQ; Pfam:pfam00270 DEAD/DEAH box helicase.
 
 
 0.717
AMM31340.1
Hypothetical protein.
  
 
 0.660
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
     
 0.658
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
 
 
 0.566
AMM32357.1
Cell division FtsK/SpoIIIE; Pfam:pfam01580 FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.
  
 0.542
AMM31962.1
DNA polymerase IV; Pfam:pfam00817 impB/mucB/samB family.
 
 
 0.525
AMM32836.1
Hypothetical protein; Pfam:pfam03993 Domain of Unknown Function (DUF349).
 
   0.520
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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