STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AMM32865.1Pfam:pfam02615 Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (348 aa)    
Predicted Functional Partners:
AMM32857.1
Putative sulfolactate sulfo-lyase large subunit; Pfam:pfam04295 D-galactarate dehydratase / Altronate hydrolase, C terminus.
 
  
 0.968
AMM32856.1
Putative sulfolactate sulfo-lyase small subunit.
 
  
 0.963
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
    
 0.912
AMM32778.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.907
AMM33713.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.907
AMM32863.1
Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
   
 0.837
AMM32864.1
Hypothetical protein; Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
     
 0.800
AMM32862.1
Putative 3-hydroxyisobutyrate dehydrogenase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
  
    0.779
AMM31949.1
Hypothetical protein.
 
    0.601
AMM31510.1
Hypothetical protein.
 
    0.527
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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