Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMM32903.1Pfam:pfam01261 Xylose isomerase-like TIM barrel. (270 aa)    
Predicted Functional Partners:
AMM31169.1
Xylulokinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain; Belongs to the FGGY kinase family.
  
 
 0.538
AMM32904.1
Putative oxidoreductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
       0.528
AMM32902.1
3-oxoacyl-[acyl-carrier-protein] reductase; Pfam:pfam00106 short chain dehydrogenase.
       0.509
AMM31831.1
5-deoxyglucuronate isomerase; Pfam:pfam04962 KduI/IolB family.
  
  
 0.453
AMM31824.1
Acetolactate synthase; Pfam:pfam00205 Thiamine pyrophosphate enzyme, central domain; Belongs to the TPP enzyme family.
 
  
 0.408
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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