STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32916.1Pfam:pfam00440 Bacterial regulatory proteins, tetR family. (216 aa)    
Predicted Functional Partners:
AMM32915.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.667
AMM32917.1
AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme.
 
   
 0.647
AMM32918.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
     0.620
AMM32919.1
Pfam:pfam14863 Alkyl sulfatase dimerization.
 
     0.607
AMM32004.1
Regulatory protein; Pfam:pfam03551 Transcriptional regulator PadR-like family.
  
   
 0.468
AMM32914.1
Beta-lactamase; Pfam:pfam00144 Beta-lactamase.
 
   
 0.449
AMM31321.1
Pfam:pfam12698 ABC-2 family transporter protein.
 
  
 0.403
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.