Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMM32917.1AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme. (518 aa)    
Predicted Functional Partners:
AMM34310.1
Indigoidine synthase; Pfam:pfam00501 AMP-binding enzyme.
  
0.884
AMM32918.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
  
 0.829
AMM32919.1
Pfam:pfam14863 Alkyl sulfatase dimerization.
 
     0.807
AMM32916.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
   
 0.641
hemL
Glutamate-1-semialdehyde 2,1-aminomutase 1; Pfam:pfam00202 Aminotransferase class-III.
 
  
 0.568
AMM32921.1
Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.551
AMM32920.1
Putative glutaryl-CoA dehydrogenase; Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
  
  
 0.543
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
  
  
 0.519
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.500
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.490
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.