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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32942.1Multidrug DMT transporter permease. (302 aa)    
Predicted Functional Partners:
AMM32280.1
Putative glycosyltransferase; Pfam:pfam00534 Glycosyl transferases group 1.
     0.904
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.664
AMM33493.1
1,4-alpha-glucan branching protein; Pfam:pfam00128 Alpha amylase, catalytic domain.
   
 0.660
AMM33271.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.616
AMM32803.1
Mannosyltransferase; Pfam:pfam00534 Glycosyl transferases group 1.
  
     0.594
AMM32802.1
Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family.
  
    0.566
AMM32641.1
Pfam:pfam00342 Phosphoglucose isomerase; Belongs to the GPI family.
 
  
 0.563
AMM32463.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
 
    0.562
AMM33025.1
Pfam:pfam09594 Protein of unknown function (DUF2029).
  
     0.561
AMM33553.1
Putative glucosyltransferase; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.541
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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