STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32978.1FAD-dependent oxidoreductase; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain. (472 aa)    
Predicted Functional Partners:
AMM30820.1
Pfam:pfam00494 Squalene/phytoene synthase.
  
  
 0.775
AMM32977.1
SAM-dependent methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
       0.773
AMM32976.1
Pfam:pfam04832 SOUL heme-binding protein.
       0.636
AMM32979.1
Transporter; Pfam:pfam00916 Sulfate transporter family.
  
    0.551
AMM30910.1
Pfam:pfam06762 Lipase maturation factor.
 
     0.417
AMM32030.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
 
  
 0.400
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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