STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33017.1Globin; Pfam:pfam01152 Bacterial-like globin. (148 aa)    
Predicted Functional Partners:
AMM33015.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
      0.864
AMM33016.1
Pfam:pfam00924 Mechanosensitive ion channel.
     
 0.848
AMM34383.1
FAD-binding dehydrogenase; Pfam:pfam00890 FAD binding domain.
      0.700
AMM34095.1
Oxidoreductase; Pfam:pfam00970 Oxidoreductase FAD-binding domain; Belongs to the globin family.
 
  
 0.633
AMM33014.1
Aminopeptidase N; Pfam:pfam01433 Peptidase family M1.
       0.630
AMM33006.1
DSBA oxidoreductase.
  
  
 0.553
AMM31244.1
Pfam:pfam01323 DSBA-like thioredoxin domain.
  
  
 0.498
AMM33904.1
ABC-type transporter involved in cytochrome C biogenesis, permease; Pfam:pfam01578 Cytochrome C assembly protein.
 
     0.448
AMM33013.1
Hypothetical protein.
       0.409
AMM31333.1
Hemoglobin-like flavoprotein; Pfam:pfam00970 Oxidoreductase FAD-binding domain; Belongs to the globin family.
  
  
 0.408
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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