STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33062.1Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (298 aa)    
Predicted Functional Partners:
AMM31999.1
Hypothetical protein; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
 
 0.920
AMM33148.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
 
 0.909
AMM30800.1
Catechol 1,2-dioxygenase; Pfam:pfam00775 Dioxygenase.
     
 0.908
AMM30804.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.902
AMM34091.1
Phenol 2-monooxygenase; Pfam:pfam01494 FAD binding domain.
    
 0.821
AMM34555.1
Phenol 2-monooxygenase; Pfam:pfam01494 FAD binding domain.
    
 0.821
AMM33349.1
Luciferase; Pfam:pfam00296 Luciferase-like monooxygenase.
 
  
 0.592
AMM33063.1
Amidohydrolase; Pfam:pfam13147 Amidohydrolase.
       0.566
AMM34242.1
Luciferase; Pfam:pfam00296 Luciferase-like monooxygenase.
 
  
 0.565
AMM33061.1
Hypothetical protein.
       0.542
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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