rpmF protein (Sinomonas atrocyanea) - STRING interaction network

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rpmF

Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family. (67 aa)

Predicted Functional Partners:

rplT

0.994

rplS

0.993

rplU

0.992

rplM

0.991

rpmB

0.991

rpsP

0.990

rplQ

0.990

rpsO

0.989

rpmI

0.989

rpsT

0.989

Your Current Organism:

Sinomonas atrocyanea

NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplQ	SA2016_2960	SA2016_2987	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam01196 Ribosomal protein L17.	0.997
rplM	rplS	SA2016_2960	SA2016_2387	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.997
rplM	rplT	SA2016_2960	SA2016_1709	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.998
rplM	rplU	SA2016_2960	SA2016_2326	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplM	rpmB	SA2016_2960	SA2016_3550	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam00830 Ribosomal L28 family; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplM	rpmF	SA2016_2960	SA2016_2407	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplM	rpmI	SA2016_2960	SA2016_1708	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam01632 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.992
rplM	rpsO	SA2016_2960	SA2016_1661	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rplM	rpsP	SA2016_2960	SA2016_2391	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam00886 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplM	rpsT	SA2016_2960	SA2016_2105	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rplQ	rplM	SA2016_2987	SA2016_2960	Pfam:pfam01196 Ribosomal protein L17.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplQ	rplS	SA2016_2987	SA2016_2387	Pfam:pfam01196 Ribosomal protein L17.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.995
rplQ	rplT	SA2016_2987	SA2016_1709	Pfam:pfam01196 Ribosomal protein L17.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.996
rplQ	rplU	SA2016_2987	SA2016_2326	Pfam:pfam01196 Ribosomal protein L17.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.988
rplQ	rpmB	SA2016_2987	SA2016_3550	Pfam:pfam01196 Ribosomal protein L17.	Pfam:pfam00830 Ribosomal L28 family; Belongs to the bacterial ribosomal protein bL28 family.	0.976
rplQ	rpmF	SA2016_2987	SA2016_2407	Pfam:pfam01196 Ribosomal protein L17.	Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplQ	rpmI	SA2016_2987	SA2016_1708	Pfam:pfam01196 Ribosomal protein L17.	Pfam:pfam01632 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.984
rplQ	rpsO	SA2016_2987	SA2016_1661	Pfam:pfam01196 Ribosomal protein L17.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplQ	rpsP	SA2016_2987	SA2016_2391	Pfam:pfam01196 Ribosomal protein L17.	Pfam:pfam00886 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.986
rplQ	rpsT	SA2016_2987	SA2016_2105	Pfam:pfam01196 Ribosomal protein L17.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.966

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