STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33115.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
AMM33114.1
Hypothetical protein.
       0.773
AMM32101.1
Thymidylate kinase; Pfam:pfam03190 Protein of unknown function, DUF255.
    
 
 0.625
AMM32231.1
Protein EssC; Pfam:pfam01580 FtsK/SpoIIIE family.
  
 
 0.490
AMM33291.1
Pfam:pfam01580 FtsK/SpoIIIE family.
  
 
 0.490
AMM33113.1
Hypothetical protein.
       0.466
AMM32761.1
Pfam:pfam05649 Peptidase family M13.
  
    0.465
AMM32850.1
Acyl carrier protein.
  
 
 0.444
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.444
AMM32357.1
Cell division FtsK/SpoIIIE; Pfam:pfam01580 FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.440
AMM31687.1
Hypothetical protein.
  
 
 0.420
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.