STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33136.1L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (565 aa)    
Predicted Functional Partners:
AMM33135.1
Nicotinate-nucleotide pyrophosphorylase (Carboxylating); Pfam:pfam01729 Quinolinate phosphoribosyl transferase, C-terminal domain.
  
 0.999
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 0.999
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
  
 0.928
AMM33130.1
Aspartate ammonia-lyase; Pfam:pfam00206 Lyase.
   
 0.918
AMM34633.1
Hypothetical protein; Pfam:pfam00710 Asparaginase.
  
 
 0.917
argG
Pfam:pfam00764 Arginosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
 0.912
pyrB
Pfam:pfam02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.907
AMM31563.1
Hypothetical protein; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
     
 0.905
AMM32847.1
Asparagine synthase; Pfam:pfam13537 Glutamine amidotransferase domain.
     
 0.903
AMM33138.1
ADP-ribose pyrophosphatase; Pfam:pfam00293 NUDIX domain.
 
   
 0.897
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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