STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33143.1Biotin/lipoyl attachment domain-containing protein; Pfam:pfam00364 Biotin-requiring enzyme. (109 aa)    
Predicted Functional Partners:
AMM33142.1
2-oxoisovalerate dehydrogenase subunit beta; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
 
 0.981
AMM33141.1
Pfam:pfam00676 Dehydrogenase E1 component.
 
 0.980
AMM32298.1
2-oxoisovalerate dehydrogenase; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
 
 0.908
AMM33234.1
2-oxoglutarate dehydrogenase, E1 subunit; Pfam:pfam00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain).
 
 0.908
AMM34375.1
2-oxoisovalerate dehydrogenase; Pfam:pfam02780 Transketolase, C-terminal domain.
 
 0.905
AMM33841.1
Transketolase, central region; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
 
 0.894
AMM32297.1
Pfam:pfam00676 Dehydrogenase E1 component.
 
 0.889
AMM33842.1
Pfam:pfam00676 Dehydrogenase E1 component.
 
 0.886
AMM34376.1
Pfam:pfam00676 Dehydrogenase E1 component.
 
 0.860
AMM32520.1
Dihydrolipoamide dehydrogenase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 0.805
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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