STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33146.1GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (239 aa)    
Predicted Functional Partners:
AMM33145.1
Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
 
    0.940
AMM33148.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
   
 0.883
AMM33147.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     0.805
AMM31995.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
  
     0.764
AMM34105.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
     0.760
AMM32432.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
  
     0.759
AMM31811.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
     0.757
AMM32106.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
     0.755
AMM34139.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
     0.748
AMM32855.1
Transcriptional regulator, GntR family protein; Pfam:pfam07729 FCD domain.
 
  
 0.723
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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