STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33152.1Pfam:pfam00324 Amino acid permease. (508 aa)    
Predicted Functional Partners:
AMM33153.1
Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain.
 
     0.766
AMM33155.1
AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain.
 
     0.684
AMM33154.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
     0.639
AMM31916.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
  
     0.536
AMM33151.1
Hypothetical protein; Pfam:pfam09350 Domain of unknown function (DUF1992).
       0.509
AMM34730.1
ABC transporter substrate-binding protein.
    
 0.508
AMM31915.1
Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
 
   
 0.499
AMM31157.1
Trehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain.
  
 0.496
AMM31203.1
Alpha-amylase; Pfam:pfam00128 Alpha amylase, catalytic domain.
   
 0.477
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.477
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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