Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AMM33152.1Pfam:pfam00324 Amino acid permease. (508 aa)    
Predicted Functional Partners:
AMM33153.1
Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain.
 
     0.758
AMM33155.1
AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain.
 
   
 0.689
AMM33154.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
     0.638
AMM31916.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
  
     0.536
AMM31915.1
Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
 
 
 
 0.514
AMM33151.1
Hypothetical protein; Pfam:pfam09350 Domain of unknown function (DUF1992).
       0.509
AMM34220.1
Pfam:pfam07905 Purine catabolism regulatory protein-like family.
 
     0.453
AMM34730.1
ABC transporter substrate-binding protein.
    
 0.422
AMM31157.1
Trehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain.
  
  0.421
AMM31203.1
Alpha-amylase; Pfam:pfam00128 Alpha amylase, catalytic domain.
   
  0.409
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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