Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM33152.1 | AMM33153.1 | SA2016_2483 | SA2016_2484 | Pfam:pfam00324 Amino acid permease. | Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain. | 0.766 |
AMM33152.1 | AMM33154.1 | SA2016_2483 | SA2016_2485 | Pfam:pfam00324 Amino acid permease. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.639 |
AMM33152.1 | AMM33155.1 | SA2016_2483 | SA2016_2486 | Pfam:pfam00324 Amino acid permease. | AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. | 0.684 |
AMM33153.1 | AMM33152.1 | SA2016_2484 | SA2016_2483 | Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain. | Pfam:pfam00324 Amino acid permease. | 0.766 |
AMM33153.1 | AMM33154.1 | SA2016_2484 | SA2016_2485 | Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.635 |
AMM33153.1 | AMM33155.1 | SA2016_2484 | SA2016_2486 | Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain. | AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. | 0.658 |
AMM33154.1 | AMM33152.1 | SA2016_2485 | SA2016_2483 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Pfam:pfam00324 Amino acid permease. | 0.639 |
AMM33154.1 | AMM33153.1 | SA2016_2485 | SA2016_2484 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain. | 0.635 |
AMM33154.1 | AMM33155.1 | SA2016_2485 | SA2016_2486 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. | 0.872 |
AMM33155.1 | AMM33152.1 | SA2016_2486 | SA2016_2483 | AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. | Pfam:pfam00324 Amino acid permease. | 0.684 |
AMM33155.1 | AMM33153.1 | SA2016_2486 | SA2016_2484 | AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. | Histamine oxidase; Pfam:pfam01179 Copper amine oxidase, enzyme domain. | 0.658 |
AMM33155.1 | AMM33154.1 | SA2016_2486 | SA2016_2485 | AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.872 |