STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33242.1Putative cysteine desulfurase; Pfam:pfam00266 Aminotransferase class-V. (466 aa)    
Predicted Functional Partners:
AMM32651.1
Cysteine desulfurase; Pfam:pfam00005 ABC transporter.
  
 0.946
AMM32151.1
Nitrogen fixation protein NifU; Pfam:pfam01592 NifU-like N terminal domain.
 
 
 0.937
AMM32649.1
Iron-regulated ABC transporter membrane component SufB; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
 
 0.919
AMM32650.1
ABC transporter permease; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
 
 
 0.901
AMM33793.1
Hypothetical protein.
  
 
 0.856
AMM32575.1
Cysteine desufuration protein SufE; Pfam:pfam02657 Fe-S metabolizm associated domain.
  
 
 0.768
AMM33243.1
Methyltransferase type 11; Pfam:pfam08241 Methyltransferase domain.
  
  
 0.627
AMM33245.1
DtxR family transcriptional regulator; Pfam:pfam02742 Iron dependent repressor, metal binding and dimerization domain.
 
    0.506
AMM33238.1
DoxX family protein; Pfam:pfam07681 DoxX.
 
    0.481
AMM32652.1
Metal-sulfur cluster biosynthetic enzyme; Pfam:pfam01883 Domain of unknown function DUF59.
 
  
 0.479
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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