STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33276.1Hypothetical protein; Pfam:pfam01943 Polysaccharide biosynthesis protein. (474 aa)    
Predicted Functional Partners:
AMM33271.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.939
AMM33553.1
Putative glucosyltransferase; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.832
AMM33273.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.831
AMM33275.1
Hypothetical protein; Pfam:pfam00535 Glycosyl transferase family 2.
  
  
 0.827
AMM33272.1
dTDP-glucose 4,6-dehydratase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.813
AMM33290.1
Pfam:pfam03275 UDP-galactopyranose mutase.
  
  
 0.749
AMM32170.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Pfam:pfam03808 Glycosyl transferase WecB/TagA/CpsF family.
  
  
 0.732
AMM32154.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.609
AMM31688.1
Pfam:pfam02350 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.598
AMM32021.1
Pfam:pfam03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain.
  
  
 0.595
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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