Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AMM33306.1Pfam:pfam10647 Lipoprotein LpqB beta-propeller domain. (571 aa)    
Predicted Functional Partners:
AMM33307.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
 0.960
AMM33308.1
Pfam:pfam00072 Response regulator receiver domain.
     
 0.816
AMM33305.1
Phosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
 
     0.650
AMM32540.1
Pfam:pfam11268 Protein of unknown function (DUF3071).
 
     0.589
AMM32380.1
Pfam:pfam07179 SseB protein N-terminal domain.
 
 
 
 0.577
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
 
    0.557
AMM33985.1
XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix.
  
     0.554
AMM31002.1
Hypothetical protein.
  
     0.549
AMM33453.1
DNA helicase; Pfam:pfam13245 Part of AAA domain.
  
     0.530
AMM31467.1
Hypothetical protein.
  
     0.522
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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