Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM33472.1Hypothetical protein; Pfam:pfam13338 Domain of unknown function (DUF4095). (296 aa)    
Predicted Functional Partners:
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
    0.535
AMM32177.1
Hypothetical protein.
  
     0.496
tsaD
tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.455
AMM33474.1
30S ribosomal protein S18; Pfam:pfam00583 Acetyltransferase (GNAT) family.
       0.455
AMM33475.1
Peptidase M22; Pfam:pfam00814 Glycoprotease family.
       0.455
AMM33476.1
Alanine racemase; Pfam:pfam02367 Uncharacterized P-loop hydrolase UPF0079.
       0.455
AMM33477.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.455
AMM31982.1
Hypothetical protein; Pfam:pfam11716 Mycothiol maleylpyruvate isomerase N-terminal domain.
  
     0.448
AMM32691.1
HNH endonuclease; Pfam:pfam02720 Domain of unknown function (DUF222).
 
     0.440
AMM33611.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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