Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM31100.1 | AMM31102.1 | SA2016_0403 | SA2016_0405 | Hypothetical protein. | Pfam:pfam12277 Protein of unknown function (DUF3618). | 0.962 |
AMM31100.1 | AMM33491.1 | SA2016_0403 | SA2016_2826 | Hypothetical protein. | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | 0.480 |
AMM31102.1 | AMM31100.1 | SA2016_0405 | SA2016_0403 | Pfam:pfam12277 Protein of unknown function (DUF3618). | Hypothetical protein. | 0.962 |
AMM31102.1 | AMM33491.1 | SA2016_0405 | SA2016_2826 | Pfam:pfam12277 Protein of unknown function (DUF3618). | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | 0.455 |
AMM32221.1 | AMM33491.1 | SA2016_1544 | SA2016_2826 | Membrane protein; Pfam:pfam03703 Bacterial PH domain. | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | 0.493 |
AMM32221.1 | AMM33492.1 | SA2016_1544 | SA2016_2827 | Membrane protein; Pfam:pfam03703 Bacterial PH domain. | Hypothetical protein; Pfam:pfam05239 PRC-barrel domain. | 0.493 |
AMM32221.1 | AMM33775.1 | SA2016_1544 | SA2016_3110 | Membrane protein; Pfam:pfam03703 Bacterial PH domain. | Photosystem reaction center subunit H; Pfam:pfam04652 Vta1 like. | 0.493 |
AMM32937.1 | AMM33491.1 | SA2016_2268 | SA2016_2826 | Pfam:pfam00781 Diacylglycerol kinase catalytic domain. | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | 0.413 |
AMM33429.1 | AMM33491.1 | SA2016_2764 | SA2016_2826 | Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | 0.478 |
AMM33429.1 | AMM33492.1 | SA2016_2764 | SA2016_2827 | Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. | Hypothetical protein; Pfam:pfam05239 PRC-barrel domain. | 0.478 |
AMM33429.1 | AMM33775.1 | SA2016_2764 | SA2016_3110 | Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. | Photosystem reaction center subunit H; Pfam:pfam04652 Vta1 like. | 0.478 |
AMM33429.1 | AMM34654.1 | SA2016_2764 | SA2016_4000 | Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. | Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. | 0.902 |
AMM33491.1 | AMM31100.1 | SA2016_2826 | SA2016_0403 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Hypothetical protein. | 0.480 |
AMM33491.1 | AMM31102.1 | SA2016_2826 | SA2016_0405 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Pfam:pfam12277 Protein of unknown function (DUF3618). | 0.455 |
AMM33491.1 | AMM32221.1 | SA2016_2826 | SA2016_1544 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Membrane protein; Pfam:pfam03703 Bacterial PH domain. | 0.493 |
AMM33491.1 | AMM32937.1 | SA2016_2826 | SA2016_2268 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Pfam:pfam00781 Diacylglycerol kinase catalytic domain. | 0.413 |
AMM33491.1 | AMM33429.1 | SA2016_2826 | SA2016_2764 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. | 0.478 |
AMM33491.1 | AMM33492.1 | SA2016_2826 | SA2016_2827 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Hypothetical protein; Pfam:pfam05239 PRC-barrel domain. | 0.685 |
AMM33491.1 | AMM33494.1 | SA2016_2826 | SA2016_2829 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Malto-oligosyltrehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain. | 0.423 |
AMM33491.1 | AMM33495.1 | SA2016_2826 | SA2016_2830 | Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382). | Glycogen operon protein GlgX-like protein; Pfam:pfam02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Belongs to the glycosyl hydrolase 13 family. | 0.420 |
page 1 of 3