STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33494.1Malto-oligosyltrehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain. (801 aa)    
Predicted Functional Partners:
AMM33493.1
1,4-alpha-glucan branching protein; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
0.999
AMM33495.1
Glycogen operon protein GlgX-like protein; Pfam:pfam02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Belongs to the glycosyl hydrolase 13 family.
 
 0.997
AMM33541.1
Glycogen debranching protein; Pfam:pfam00128 Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
 
 0.990
AMM31480.1
Trehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
 
 0.977
AMM34302.1
Pfam:pfam02446 4-alpha-glucanotransferase.
  
 0.972
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
  
 0.909
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
  
 0.907
AMM31475.1
Glycogen operon protein GlgX-like protein; Pfam:pfam00128 Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
  
 0.876
AMM31157.1
Trehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
  
 0.778
AMM31487.1
Trehalose 6-phosphate synthase; Pfam:pfam00982 Glycosyltransferase family 20.
  
  
 0.774
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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