STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33509.1AB hydrolase superfamily protein YdjP; Pfam:pfam12697 Alpha/beta hydrolase family. (250 aa)    
Predicted Functional Partners:
AMM33797.1
Putative acetyltransferase; Pfam:pfam12697 Alpha/beta hydrolase family.
 
     0.808
AMM33508.1
Glyoxalase; Pfam:pfam12681 Glyoxalase-like domain.
  
  
 0.565
AMM33506.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
  
    0.533
AMM33507.1
Two component transcriptional regulator, winged helix family; Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
  
    0.533
AMM31191.1
Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain.
  
   0.460
AMM32802.1
Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.449
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.418
AMM32850.1
Acyl carrier protein.
  
 
 0.411
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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