STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (348 aa)    
Predicted Functional Partners:
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.999
AMM33553.1
Putative glucosyltransferase; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.987
AMM32064.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
 
 
 0.951
AMM33549.1
Pfam:pfam00534 Glycosyl transferases group 1.
 
  
 0.725
AMM33271.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.715
AMM33552.1
Pfam:pfam03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain.
  
  
 0.710
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
      0.653
AMM33209.1
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase; Pfam:pfam02719 Polysaccharide biosynthesis protein.
  
  
 0.599
AMM32154.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.592
AMM32170.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Pfam:pfam03808 Glycosyl transferase WecB/TagA/CpsF family.
  
  
 0.509
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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