Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMM33556.1Hypothetical protein; Pfam:pfam01494 FAD binding domain. (350 aa)    
Predicted Functional Partners:
AMM31241.1
SAM-dependent methlyltransferase; Pfam:pfam12847 Methyltransferase domain.
  
 0.563
AMM33608.1
Methyltransferase type 12; Pfam:pfam13649 Methyltransferase domain.
  
 0.563
AMM34514.1
Pfam:pfam00067 Cytochrome P450.
 
 
 0.558
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
   
  
 0.521
AMM31446.1
Pfam:pfam00067 Cytochrome P450.
  
 
 0.493
AMM33555.1
Hypothetical protein.
       0.461
AMM32738.1
Pfam:pfam03109 ABC1 family.
   
 0.460
AMM34284.1
Putative unusual protein kinase; Pfam:pfam03109 ABC1 family.
   
 0.460
AMM31795.1
Portal protein; Pfam:pfam13738 Pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.440
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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