Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM33560.1Hypothetical protein; Pfam:pfam04652 Vta1 like. (205 aa)    
Predicted Functional Partners:
AMM33559.1
Putative hydrolase; Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family.
  
   0.648
AMM32101.1
Thymidylate kinase; Pfam:pfam03190 Protein of unknown function, DUF255.
  
 
 
 0.641
AMM33558.1
Pfam:pfam11950 Protein of unknown function (DUF3467).
       0.556
AMM34039.1
Protein tyrosine phosphatase; Pfam:pfam01451 Low molecular weight phosphotyrosine protein phosphatase.
  
 
 
 0.512
AMM32761.1
Pfam:pfam05649 Peptidase family M13.
  
    0.510
AMM33561.1
Multidrug MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
       0.503
AMM31941.1
Pfam:pfam12587 Protein of unknown function (DUF3761).
 
  
 0.495
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
 
     0.493
AMM30790.1
N-methyltryptophan oxidase; Pfam:pfam01266 FAD dependent oxidoreductase.
 
     0.484
AMM32231.1
Protein EssC; Pfam:pfam01580 FtsK/SpoIIIE family.
  
 
 0.450
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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