STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33578.1Hypothetical protein; Pfam:pfam08310 LGFP repeat. (1175 aa)    
Predicted Functional Partners:
AMM33420.1
Hypothetical protein; Pfam:pfam04185 Phosphoesterase family.
  
     0.667
AMM32731.1
Hypothetical protein; Pfam:pfam14269 Arylsulfotransferase (ASST).
  
     0.574
AMM31909.1
Isomalto dextranase.
  
    0.536
AMM31958.1
Pfam:pfam12587 Protein of unknown function (DUF3761).
  
     0.487
AMM31720.1
Hypothetical protein; Pfam:pfam04185 Phosphoesterase family.
  
     0.471
AMM33577.1
6-phosphofructokinase; Pfam:pfam00294 pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
       0.464
AMM33862.1
Phospholipase C; Pfam:pfam04185 Phosphoesterase family.
  
     0.453
AMM34081.1
ABC transporter substrate-binding protein; Pfam:pfam09084 NMT1/THI5 like.
  
     0.435
AMM31783.1
Pfam:pfam04185 Phosphoesterase family.
  
     0.425
AMM31782.1
Phospholipase; Pfam:pfam04185 Phosphoesterase family.
  
     0.416
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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