STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33651.1Diguanylate cyclase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (552 aa)    
Predicted Functional Partners:
AMM33650.1
Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain.
 
 0.936
AMM31601.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
0.931
AMM31762.1
Alkaline phosphatase; Pfam:pfam00072 Response regulator receiver domain.
 
 0.896
AMM33308.1
Pfam:pfam00072 Response regulator receiver domain.
 
 0.866
AMM31444.1
XRE family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
 
 0.861
AMM31466.1
Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
 
 0.857
AMM31254.1
Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
 
 0.856
AMM31315.1
Pfam:pfam00072 Response regulator receiver domain.
 
 0.849
AMM32252.1
Putative transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
 
 0.844
AMM31592.1
Two component transcriptional regulator, winged helix family; Pfam:pfam00072 Response regulator receiver domain.
 
 0.843
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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