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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33660.1Pfam:pfam03576 Peptidase family S58. (362 aa)    
Predicted Functional Partners:
AMM33659.1
Hypothetical protein; Pfam:pfam10604 Polyketide cyclase / dehydrase and lipid transport.
       0.559
AMM32094.1
Protease; Pfam:pfam01694 Rhomboid family.
 
   
 0.474
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
  
 0.448
AMM33661.1
Glycerol-3-phosphate ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.448
AMM33662.1
Glycerol-3-phosphate ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.448
AMM33175.1
Hypothetical protein; Pfam:pfam09438 Domain of unknown function (DUF2017).
  
  
 0.417
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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