Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMM33776.1Hypothetical protein. (501 aa)    
Predicted Functional Partners:
AMM33777.1
Hypothetical protein.
       0.773
AMM32231.1
Protein EssC; Pfam:pfam01580 FtsK/SpoIIIE family.
 
  
 0.606
AMM31428.1
Flagellar motor switch protein FliN; Pfam:pfam01052 Surface presentation of antigens (SPOA).
   
 
 0.554
AMM33689.1
Pfam:pfam00232 Glycosyl hydrolase family 1.
   
 
 0.508
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.504
AMM32170.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Pfam:pfam03808 Glycosyl transferase WecB/TagA/CpsF family.
  
 
 0.494
AMM33775.1
Photosystem reaction center subunit H; Pfam:pfam04652 Vta1 like.
       0.489
AMM32228.1
FHA domain containing protein.
 
    0.487
AMM31687.1
Hypothetical protein.
   
 
 0.486
AMM31498.1
Rhs family protein; Pfam:pfam05593 RHS Repeat.
  
  
 0.476
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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