STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33780.1Thioredoxin; Pfam:pfam00085 Thioredoxin; Belongs to the thioredoxin family. (125 aa)    
Predicted Functional Partners:
AMM34731.1
Thioredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.922
AMM31038.1
Flavoprotein; Pfam:pfam13738 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.711
AMM31326.1
Pyridine nucleotide-disulfide oxidoreductase dimerization region; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.680
AMM32633.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.658
AMM32874.1
Glutaredoxin-like protein; Pfam:pfam00462 Glutaredoxin.
  
  
 0.641
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.612
AMM34039.1
Protein tyrosine phosphatase; Pfam:pfam01451 Low molecular weight phosphotyrosine protein phosphatase.
 
 
 0.553
groS
Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
  
 
 0.543
AMM33782.1
ArsR family transcriptional regulator; Pfam:pfam12802 MarR family.
  
  
 0.542
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
   
 
 0.530
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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