STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33859.1Phenylacetic acid degradation protein PaaD; Pfam:pfam03061 Thioesterase superfamily. (153 aa)    
Predicted Functional Partners:
AMM33860.1
phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.991
AMM33850.1
phenylacetate-CoA oxygenase; Pfam:pfam06243 Phenylacetic acid degradation B.
 
 
 0.985
AMM33848.1
Phenylacetic acid degradation protein; Pfam:pfam01883 Domain of unknown function DUF59.
 
 
 0.984
AMM33849.1
Phenylacetate-CoA oxygenase subunit PaaI; Pfam:pfam05138 Phenylacetic acid catabolic protein.
 
 
 0.984
AMM33851.1
Phenylacetate-CoA oxygenase subunit PaaA; Pfam:pfam05138 Phenylacetic acid catabolic protein.
 
 
 0.984
AMM33847.1
Phenylacetic acid degradation protein; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
 
  0.980
AMM33622.1
Coenzyme F390 synthetase.
  
 
 0.925
AMM30958.1
Amidase family protein; Pfam:pfam01425 Amidase; Belongs to the amidase family.
    
  0.902
AMM34479.1
Pfam:pfam03069 Acetamidase/Formamidase family.
     
  0.900
AMM33879.1
enoyl-CoA hydratase; Pfam:pfam00171 Aldehyde dehydrogenase family.
 
  
 0.840
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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