STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33861.1Pfam:pfam00440 Bacterial regulatory proteins, tetR family. (209 aa)    
Predicted Functional Partners:
AMM33860.1
phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
     0.739
AMM33879.1
enoyl-CoA hydratase; Pfam:pfam00171 Aldehyde dehydrogenase family.
 
   
 0.599
AMM33847.1
Phenylacetic acid degradation protein; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.570
AMM33859.1
Phenylacetic acid degradation protein PaaD; Pfam:pfam03061 Thioesterase superfamily.
 
     0.547
AMM33846.1
Crotonase; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
    0.487
AMM33862.1
Phospholipase C; Pfam:pfam04185 Phosphoesterase family.
       0.471
AMM33850.1
phenylacetate-CoA oxygenase; Pfam:pfam06243 Phenylacetic acid degradation B.
 
     0.432
AMM33848.1
Phenylacetic acid degradation protein; Pfam:pfam01883 Domain of unknown function DUF59.
 
     0.431
AMM33851.1
Phenylacetate-CoA oxygenase subunit PaaA; Pfam:pfam05138 Phenylacetic acid catabolic protein.
 
     0.429
AMM33155.1
AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain.
  
   
 0.405
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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