STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33867.1Pfam:pfam00440 Bacterial regulatory proteins, tetR family. (288 aa)    
Predicted Functional Partners:
AMM33866.1
PTS system, mannitol-specific IIABC component; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
       0.616
mtlD
Mannitol-1-phosphate 5-dehydrogenase; Pfam:pfam08125 Mannitol dehydrogenase C-terminal domain.
       0.615
AMM32149.1
Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
  
   
 0.573
AMM33868.1
Hypothetical protein.
       0.551
AMM33869.1
Hypothetical protein; Pfam:pfam10282 Lactonase, 7-bladed beta-propeller.
       0.533
AMM33870.1
Metal ABC transporter ATPase; Pfam:pfam00122 E1-E2 ATPase.
       0.526
AMM32153.1
Hypothetical protein; Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
  
     0.470
AMM33605.1
Hypothetical protein; Pfam:pfam00990 GGDEF domain.
  
 
 0.457
AMM31159.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
  
     0.426
AMM30733.1
Hypothetical protein.
  
   
 0.414
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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