STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33870.1Metal ABC transporter ATPase; Pfam:pfam00122 E1-E2 ATPase. (826 aa)    
Predicted Functional Partners:
AMM33869.1
Hypothetical protein; Pfam:pfam10282 Lactonase, 7-bladed beta-propeller.
       0.762
AMM33868.1
Hypothetical protein.
       0.736
AMM31498.1
Rhs family protein; Pfam:pfam05593 RHS Repeat.
   
 
 0.587
AMM31552.1
Hypothetical protein; Pfam:pfam02308 MgtC family.
 
 
 0.586
AMM33867.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
       0.526
AMM33858.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
    0.504
AMM31295.1
Transporter, CPA2 family; Pfam:pfam00999 Sodium/hydrogen exchanger family.
 
 
 0.490
AMM31448.1
Pfam:pfam01145 SPFH domain / Band 7 family.
   
 0.465
AMM32722.1
Pfam:pfam01145 SPFH domain / Band 7 family.
   
 0.465
AMM32034.1
Membrane protein; Pfam:pfam07681 DoxX.
   
  0.462
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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