Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM33872.1hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. (319 aa)    
Predicted Functional Partners:
AMM34428.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
 
 0.943
AMM33873.1
Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family.
 
 0.936
AMM32305.1
Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.935
AMM33932.1
3-oxoacid CoA-transferase subunit A; Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.935
AMM32306.1
Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.932
AMM33931.1
Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.932
AMM32564.1
Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.928
AMM32655.1
3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.928
AMM32688.1
Acetyl-CoA acyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.928
AMM32921.1
Acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.928
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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