STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33876.1L-carnitine dehydratase/bile acid-inducible protein F; Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. (490 aa)    
Predicted Functional Partners:
AMM33877.1
Pfam:pfam13230 Glutamine amidotransferases class-II.
  
    0.781
AMM33879.1
enoyl-CoA hydratase; Pfam:pfam00171 Aldehyde dehydrogenase family.
  
 0.555
AMM33878.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Pfam:pfam12681 Glyoxalase-like domain.
  
    0.521
AMM31643.1
Membrane protein.
 
     0.400
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.